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Pull requests: galaxyproject/galaxy

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Pull requests list

Update Python dependencies area/dependencies kind/enhancement
#20537 opened Jun 21, 2025 by galaxybot Loading… 25.1
[25.0] Use venv instead of virtualenv in package make setup-venv area/packaging
#20536 opened Jun 20, 2025 by natefoo Loading…
2 of 4 tasks
25.1
2
[25.0] Prevent DCE collections from being renamed area/UI-UX kind/bug
#20534 opened Jun 20, 2025 by ahmedhamidawan Loading…
2 of 4 tasks
25.1
[24.2] Update Gravity to 1.0.8 area/dependencies
#20523 opened Jun 19, 2025 by natefoo Loading…
2 of 4 tasks
25.0
[25.0] Improve workflow monitor loop times area/workflows
#20522 opened Jun 19, 2025 by mvdbeek • Draft
1 of 4 tasks
25.1
5
[25.0] Bump up python for for pulsar package tests
#20521 opened Jun 19, 2025 by mvdbeek Loading…
1 of 4 tasks
25.1
2
Bump urllib3 from 2.4.0 to 2.5.0 in /lib/galaxy/dependencies area/dependencies dependencies Pull requests that update a dependency file minor python Pull requests that update Python code
#20515 opened Jun 18, 2025 by dependabot bot Loading… 25.1
Bump requests from 2.32.3 to 2.32.4 in /packages/meta area/packaging dependencies Pull requests that update a dependency file python Pull requests that update Python code
#20513 opened Jun 18, 2025 by dependabot bot Loading… 25.1
3
Bump tornado from 6.4.2 to 6.5 in /packages/meta area/packaging dependencies Pull requests that update a dependency file minor python Pull requests that update Python code
#20512 opened Jun 18, 2025 by dependabot bot Loading… 25.1
Remove deprecated tool document cache area/admin area/API area/database Galaxy's database or data access layer area/dependencies area/documentation area/packaging area/tool-framework area/util kind/enhancement kind/refactoring cleanup or refactoring of existing code, no functional changes
#20510 opened Jun 18, 2025 by nsoranzo Loading…
2 of 4 tasks
25.1
1
1
Show expose_user_name in /api/configuration
#20504 opened Jun 18, 2025 by bernt-matthias Loading…
1 of 4 tasks
25.1
[25.0] Add redis conditional dependency area/dependencies kind/bug kind/enhancement
#20502 opened Jun 18, 2025 by davelopez Loading…
2 of 4 tasks
25.1
1
5
Add username_key setting to configure python-social-auth OIDC area/auth Authentication and authorization area/testing
#20497 opened Jun 17, 2025 by marius-mather Loading…
2 of 4 tasks
25.1
[25.0] add fasta.bz2 as auto_compressed type area/datatypes
#20496 opened Jun 17, 2025 by bernt-matthias Loading…
1 of 4 tasks
25.1
[25.0] Add Auspice JSON datatype area/datatypes
#20466 opened Jun 15, 2025 by pvanheus Loading…
2 of 4 tasks
25.1
7
[25.0] Remove num_unique_values tiff metadata element area/datatypes area/performance kind/bug
#20464 opened Jun 15, 2025 by mvdbeek Loading…
1 of 4 tasks
25.1
3
Fix transient selenium error when adding collection input. area/testing/selenium area/workflows kind/bug
#20460 opened Jun 14, 2025 by jmchilton Loading…
2 tasks done
25.1
Automatically initialize Apptainer area/jobs area/testing/integration area/testing area/tool-dependencies area/tool-framework area/util
#20447 opened Jun 12, 2025 by natefoo Loading…
4 tasks done
25.1
1
Add DRS compact identifier support area/testing/integration area/testing
#20410 opened Jun 6, 2025 by dannon • Draft
1 of 4 tasks
3
Retrieve source hash from file sources that support it, use hash to deduplicate datasets. area/database Galaxy's database or data access layer area/tool-framework area/util
#20409 opened Jun 5, 2025 by mvdbeek • Draft
1 of 4 tasks
2
(Re)move job_conf.xml.sample_advanced area/jobs area/testing kind/refactoring cleanup or refactoring of existing code, no functional changes
#20406 opened Jun 5, 2025 by bernt-matthias Loading…
1 of 4 tasks
25.1
1
[WIP] Use GModal in Selection Dialog area/UI-UX kind/enhancement kind/refactoring cleanup or refactoring of existing code, no functional changes
#20375 opened May 29, 2025 by ahmedhamidawan • Draft
1 of 4 tasks
Decouple visualization installation from the client build process area/admin area/API
#20371 opened May 29, 2025 by dannon • Draft
1 of 4 tasks
2
removing 8 year old note that points at a non-existent subdomain area/admin area/documentation
#20361 opened May 27, 2025 by scottcain Loading…
1 task done
25.1
1
WIP: Implement TUS upload for invocation imports area/testing/integration area/testing
#20359 opened May 27, 2025 by mvdbeek Loading…
1 of 4 tasks
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